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1.
Biochem Soc Trans ; 52(2): 849-860, 2024 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-38451193

RESUMEN

Intermediate filaments (IFs) are cytoskeletal elements involved in mechanotransduction and in the integration of cellular responses. They are versatile structures and their assembly and organization are finely tuned by posttranslational modifications. Among them, type III IFs, mainly vimentin, have been identified as targets of multiple oxidative and electrophilic modifications. A characteristic of most type III IF proteins is the presence in their sequence of a single, conserved cysteine residue (C328 in vimentin), that is a hot spot for these modifications and appears to play a key role in the ability of the filament network to respond to oxidative stress. Current structural models and experimental evidence indicate that this cysteine residue may occupy a strategic position in the filaments in such a way that perturbations at this site, due to chemical modification or mutation, impact filament assembly or organization in a structure-dependent manner. Cysteine-dependent regulation of vimentin can be modulated by interaction with divalent cations, such as zinc, and by pH. Importantly, vimentin remodeling induced by C328 modification may affect its interaction with cellular organelles, as well as the cross-talk between cytoskeletal networks, as seems to be the case for the reorganization of actin filaments in response to oxidants and electrophiles. In summary, the evidence herein reviewed delineates a complex interplay in which type III IFs emerge both as targets and modulators of redox signaling.


Asunto(s)
Cisteína , Filamentos Intermedios , Oxidación-Reducción , Cisteína/metabolismo , Cisteína/química , Filamentos Intermedios/metabolismo , Humanos , Animales , Vimentina/metabolismo , Vimentina/química , Procesamiento Proteico-Postraduccional , Estrés Oxidativo , Citoesqueleto/metabolismo
2.
Curr Opin Cell Biol ; 86: 102317, 2024 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-38171142

RESUMEN

Vimentin, a type III intermediate filament, reorganizes into what is termed the 'vimentin cage' in response to various pathogenic infections. This cage-like structure provides an envelope to key components of the pathogen's life cycle. In viral infections, the vimentin cage primarily serves as a scaffold and organizer for the replication factory, promoting viral replication. However, it also occasionally contributes to antiviral functions. For bacterial infections, the cage mainly supports bacterial proliferation in most observed cases. These consistent structural alterations in vimentin, induced by a range of viruses and bacteria, highlight the vimentin cage's crucial role. Pathogen-specific factors add complexity to this interaction. In this review, we provide a thorough overview of the functions and mechanisms of the vimentin cage and speculate on vimentin's potential as a novel target for anti-pathogen strategies.


Asunto(s)
Filamentos Intermedios , Virosis , Humanos , Vimentina/química
3.
J Exp Med ; 220(12)2023 12 04.
Artículo en Inglés | MEDLINE | ID: mdl-37831103

RESUMEN

Rheumatoid arthritis occurs most often in people who express HLA-DR molecules containing a five aa "shared epitope" in the ß chain. These MHCII molecules preferentially bind citrullinated peptides formed by posttranslational modification of arginine. Citrullinated peptide:HLA-DR complexes may act as arthritis-initiating neo-antigens for CD4+ T cells. Here, we used fluorophore-conjugated HLA-DR tetramers containing citrullinated peptides from human cartilage intermediate layer protein, fibrinogen, vimentin, or enolase 1 to track cognate CD4+ T cells. Immunization of HLA-DR transgenic mice with citrullinated peptides from vimentin or enolase 1 failed to cause any expansion of tetramer-binding cells, whereas immunization with citrullinated peptides from cartilage intermediate layer protein or fibrinogen elicited some expansion. The expanded tetramer-binding populations, however, had lower T helper 1 and higher regulatory T cell frequencies than populations elicited by viral peptides. These results indicate that HLA-DR-bound citrullinated peptides are not neo-antigens and induce varying degrees of immune tolerance that could pose a barrier to rheumatoid arthritis.


Asunto(s)
Artritis Reumatoide , Linfocitos T CD4-Positivos , Tolerancia Inmunológica , Animales , Humanos , Ratones , Fibrinógeno , Antígenos HLA-DR , Ratones Transgénicos , Péptidos , Péptidos Cíclicos , Fosfopiruvato Hidratasa/metabolismo , Vimentina/química , Citrulinación
4.
Curr Opin Cell Biol ; 85: 102233, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-37677998

RESUMEN

Vimentin, an intermediate filament protein typically located in the cytoplasm of mesenchymal cells, can also be secreted as an extracellular protein. The organization of extracellular vimentin strongly determines its functions in physiological and pathological conditions, making it a promising target for future therapeutic interventions. The extracellular form of vimentin has been found to play a role in the interaction between host cells and pathogens. In this review, we first discuss the molecular biophysics of extracellular vimentin, including its structure, secretion, and adhesion properties. We then provide a general overview of the role of extracellular vimentin in mediating pathogen-host interactions, with a focus on its interactions with viruses and bacteria. We also discuss the implications of these findings for the development of new therapeutic strategies for combating infectious diseases.


Asunto(s)
Proteínas de Filamentos Intermediarios , Filamentos Intermedios , Vimentina/química , Vimentina/metabolismo , Filamentos Intermedios/metabolismo , Interacciones Huésped-Patógeno
5.
Redox Biol ; 64: 102756, 2023 08.
Artículo en Inglés | MEDLINE | ID: mdl-37285743

RESUMEN

Cysteine residues can undergo multiple posttranslational modifications with diverse functional consequences, potentially behaving as tunable sensors. The intermediate filament protein vimentin has important implications in pathophysiology, including cancer progression, infection, and fibrosis, and maintains a close interplay with other cytoskeletal structures, such as actin filaments and microtubules. We previously showed that the single vimentin cysteine, C328, is a key target for oxidants and electrophiles. Here, we demonstrate that structurally diverse cysteine-reactive agents, including electrophilic mediators, oxidants and drug-related compounds, disrupt the vimentin network eliciting morphologically distinct reorganizations. As most of these agents display broad reactivity, we pinpointed the importance of C328 by confirming that local perturbations introduced through mutagenesis provoke structure-dependent vimentin rearrangements. Thus, GFP-vimentin wild type (wt) forms squiggles and short filaments in vimentin-deficient cells, the C328F, C328W, and C328H mutants generate diverse filamentous assemblies, and the C328A and C328D constructs fail to elongate yielding dots. Remarkably, vimentin C328H structures resemble the wt, but are strongly resistant to electrophile-elicited disruption. Therefore, the C328H mutant allows elucidating whether cysteine-dependent vimentin reorganization influences other cellular responses to reactive agents. Electrophiles such as 1,4-dinitro-1H-imidazole and 4-hydroxynonenal induce robust actin stress fibers in cells expressing vimentin wt. Strikingly, under these conditions, vimentin C328H expression blunts electrophile-elicited stress fiber formation, apparently acting upstream of RhoA. Analysis of additional vimentin C328 mutants shows that electrophile-sensitive and assembly-defective vimentin variants permit induction of stress fibers by reactive species, whereas electrophile-resistant filamentous vimentin structures prevent it. Together, our results suggest that vimentin acts as a break for actin stress fibers formation, which would be released by C328-aided disruption, thus allowing full actin remodeling in response to oxidants and electrophiles. These observations postulate C328 as a "sensor" transducing structurally diverse modifications into fine-tuned vimentin network rearrangements, and a gatekeeper for certain electrophiles in the interplay with actin.


Asunto(s)
Actinas , Filamentos Intermedios , Filamentos Intermedios/química , Actinas/genética , Actinas/química , Vimentina/genética , Vimentina/química , Cisteína/metabolismo , Oxidantes/metabolismo
6.
Biomacromolecules ; 24(6): 2512-2521, 2023 06 12.
Artículo en Inglés | MEDLINE | ID: mdl-37132386

RESUMEN

Within a cell, intermediate filaments interact with other cytoskeletal components, altogether providing the cell's mechanical stability. However, little attention has been drawn to intermediate filaments close to the plasma membrane. In this cortex configuration, the filaments are coupled and arranged in parallel to the membrane, and the question arises of how they react to the mechanical stretching of the membrane. To address this question, we set out to establish an in vitro system composed of a polydimethylsiloxane-supported lipid bilayer. With a uniaxial stretching device, the supported membrane was stretched up to 34% in the presence of a lipid reservoir that was provided by adding small unilamellar vesicles in the solution. After vimentin attachment to the membrane, we observed structural changes of the vimentin filaments in networks of different densities by fluorescence microscopy and atomic force microscopy. We found that individual filaments respond to the membrane stretching with a reorganization along the stretching direction as well as an intrinsic elongation, while in a dense network, mainly filament reorganization was observed.


Asunto(s)
Citoesqueleto , Filamentos Intermedios , Filamentos Intermedios/química , Filamentos Intermedios/metabolismo , Vimentina/análisis , Vimentina/química , Vimentina/metabolismo , Membrana Celular , Membranas
7.
Glycobiology ; 33(1): 17-37, 2023 01 08.
Artículo en Inglés | MEDLINE | ID: mdl-36190502

RESUMEN

O-linked ß-N-acetylglucosamine (O-GlcNAc)-modified proteins are post-translationally modified with GlcNAc conjugated to serine and threonine residues. This modification is associated with various physiological functions such as serine and threonine phosphorylation and Notch signaling. Here, we demonstrated that O-GlcNAc-modified proteins leaked from dead cells and GlcNAc-bearing polymers mimicking the multivalent GlcNAc moiety of these proteins induced anti-fibrotic activities, such as the suppression of α-smooth muscle actin and collagen and the induction of matrix metalloprotease 1 in myofibroblasts. We have previously reported that O-GlcNAc-modified proteins and GlcNAc-bearing polymers could interact with cell surface vimentin and desmin. In the current study, it was demonstrated that a multivalent GlcNAc moiety structure of these molecules activated PI3K/Akt and p38MAPK pathway and elicited these anti-fibrotic activities in myofibroblasts by interacting with cell surface vimentin. Since the interaction of O-GlcNAc-modified proteins with desmin was observed in the fibrotic liver of carbon tetrachloride-treated mice via an in situ proximity ligation assay, it was assumed that the activated stellate cells could bind to the O-GlcNAc-modified proteins from the damaged hepatocytes. In addition, the administration of anti-O-GlcNAc antibody to inhibit the interaction exacerbated liver fibrosis in the mice. Moreover, administration of the GlcNAc-bearing polymers into carbon tetrachloride-treated mice could ameliorate liver fibrosis. Thus, O-GlcNAc-modified proteins leaked from dead cells can interact with myofibroblasts and activated stellate cells and function as fibrosis suppressors. Moreover, we anticipate that GlcNAc-bearing polymers mimicking O-GlcNAc-modified proteins will be applied as novel therapeutic tools for fibrosis.


Asunto(s)
Acetilglucosamina , Miofibroblastos , Animales , Ratones , Acetilglucosamina/metabolismo , Materiales Biomiméticos/farmacología , Tetracloruro de Carbono , Desmina/metabolismo , Cirrosis Hepática , Miofibroblastos/metabolismo , Fosfatidilinositol 3-Quinasas/metabolismo , Polímeros/química , Polímeros/metabolismo , Procesamiento Proteico-Postraduccional , Serina/metabolismo , Vimentina/química , Vimentina/metabolismo , Células Estrelladas Hepáticas/metabolismo
8.
Protein Sci ; 31(12): e4505, 2022 12.
Artículo en Inglés | MEDLINE | ID: mdl-36369679

RESUMEN

Intermediate filaments (IFs) form an essential part of the metazoan cytoskeleton. Despite a long history of research, a proper understanding of their molecular architecture and assembly process is still lacking. IFs self-assemble from elongated dimers, which are defined by their central "rod" domain. This domain forms an α-helical coiled coil consisting of three segments called coil1A, coil1B, and coil2. It has been hypothesized that the structural plasticity of the dimer, including the unraveling of some coiled-coil regions, is essential for the assembly process. To systematically explore this possibility, we have studied six 50-residue fragments covering the entire rod domain of human vimentin, a model IF protein. After creating in silico models of these fragments, their evaluation using molecular dynamics was performed. Large differences were seen across the six fragments with respect to their structural variability during a 100 ns simulation. Next, the fragments were prepared recombinantly, whereby their correct dimerization was promoted by adding short N- or C-terminal capping motifs. The capped fragments were subjected to circular dichroism measurements at varying temperatures. The obtained melting temperatures reveal the relative stabilities of individual fragments, which correlate well with in silico results. We show that the least stable regions of vimentin rod are coil1A and the first third of coil2, while the structures of coil1B and the rest of coil2 are significantly more robust. These observations are in line with the data obtained using other experimental approaches, and contribute to a better understanding of the molecular mechanisms driving IF assembly.


Asunto(s)
Filamentos Intermedios , Simulación de Dinámica Molecular , Humanos , Secuencia de Aminoácidos , Cristalografía por Rayos X , Filamentos Intermedios/química , Filamentos Intermedios/metabolismo , Vimentina/genética , Vimentina/análisis , Vimentina/química
9.
Methods Mol Biol ; 2478: 677-700, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36063338

RESUMEN

The eukaryotic cytoskeleton consists of three different types of biopolymers - microtubules, actin filaments, and intermediate filaments - and provides cells with versatile mechanical properties, combining stability and flexibility. The unique molecular structure of intermediate filaments leads to high extensibility and stability under load. With high laser power dual optical tweezers, the mechanical properties of intermediate filaments may be investigated, while monitoring the extension with fluorescence microscopy. Here, we provide detailed protocols for the preparation of single vimentin intermediate filaments and general measurement protocols for (i) stretching experiments, (ii) repeated loading and relaxation cycles, and (iii) force-clamp experiments. We describe methods for the analysis of the experimental data in combination with computational modeling approaches.


Asunto(s)
Citoesqueleto , Filamentos Intermedios , Citoesqueleto de Actina , Filamentos Intermedios/química , Microtúbulos , Vimentina/química
10.
Proc Natl Acad Sci U S A ; 119(10): e2115217119, 2022 03 08.
Artículo en Inglés | MEDLINE | ID: mdl-35235449

RESUMEN

The cytoskeleton of eukaryotic cells is primarily composed of networks of filamentous proteins, F-actin, microtubules, and intermediate filaments. Interactions among the cytoskeletal components are important in determining cell structure and in regulating cell functions. For example, F-actin and microtubules work together to control cell shape and polarity, while the subcellular organization and transport of vimentin intermediate filament (VIF) networks depend on their interactions with microtubules. However, it is generally thought that F-actin and VIFs form two coexisting but separate networks that are independent due to observed differences in their spatial distribution and functions. In this paper, we present a closer investigation of both the structural and functional interplay between the F-actin and VIF cytoskeletal networks. We characterize the structure of VIFs and F-actin networks within the cell cortex using structured illumination microscopy and cryo-electron tomography. We find that VIFs and F-actin form an interpenetrating network (IPN) with interactions at multiple length scales, and VIFs are integral components of F-actin stress fibers. From measurements of recovery of cell contractility after transient stretching, we find that the IPN structure results in enhanced contractile forces and contributes to cell resilience. Studies of reconstituted networks and dynamic measurements in cells suggest direct and specific associations between VIFs and F-actin. From these results, we conclude that VIFs and F-actin work synergistically, both in their structure and in their function. These results profoundly alter our understanding of the contributions of the components of the cytoskeleton, particularly the interactions between intermediate filaments and F-actin.


Asunto(s)
Citoplasma/metabolismo , Filamentos Intermedios/metabolismo , Vimentina/metabolismo , Citoesqueleto de Actina/metabolismo , Actinas/química , Actinas/metabolismo , Animales , Biopolímeros/metabolismo , Células Cultivadas , Tomografía con Microscopio Electrónico/métodos , Filamentos Intermedios/química , Ratones , Vimentina/química
11.
Biophys J ; 121(6): 1094-1104, 2022 03 15.
Artículo en Inglés | MEDLINE | ID: mdl-35124070

RESUMEN

Intermediate filament (IF) proteins assemble into highly flexible filaments that organize into complex cytoplasmic networks: keratins in all types of epithelia, vimentin in endothelia, and desmin in muscle. Since IF elongation proceeds via end-to-end annealing of unit-length filaments and successively of progressively growing filaments, it is important to know how their remarkable flexibility, i.e., their persistence length lp, influences the assembly kinetics. In fact, their lp ranges between 0.3 µm (keratin K8/K18) and 1.0 µm (vimentin and desmin), and thus is orders of magnitude lower than that of microtubules and F-actin. Here, we present a unique mathematical model, which implements the semiflexible nature of the three IF types based on published semiflexible polymers theories and depends on a single free parameter k0. Calibrating this model to filament mean length dynamics of the three proteins, we demonstrate that the persistence length is indeed essential to accurately describe their assembly kinetics. Furthermore, we reveal that the difference in flexibility alone does not explain the significantly faster assembly rate of keratin filaments compared with that of vimentin. Likewise, desmin assembles approximately six times faster than vimentin, even though both their filaments exhibit the same lp value. These data strongly indicate that differences in their individual amino acid sequences significantly impact the assembly rates. Nevertheless, using a single k0 value for each of these three key representatives of the IF protein family, our advanced model does accurately describe the length distribution and mean length dynamics and provides effective filament assembly rates. It thus provides a tool for future investigations on the impact of posttranslational modifications or amino acid changes of IF proteins on assembly kinetics. This is an important issue, as the discovery of mutations in IF genes causing severe human disease, particularly for desmin and keratins, is steadily increasing.


Asunto(s)
Proteínas de Filamentos Intermediarios , Filamentos Intermedios , Desmina/química , Humanos , Proteínas de Filamentos Intermediarios/metabolismo , Filamentos Intermedios/metabolismo , Queratinas/química , Queratinas/metabolismo , Modelos Teóricos , Vimentina/química
12.
Viruses ; 13(12)2021 12 10.
Artículo en Inglés | MEDLINE | ID: mdl-34960740

RESUMEN

Understanding and modulating the early steps in oncogenic Human Papillomavirus (HPV) infection has great cancer-preventative potential, as this virus is the etiological agent of virtually all cervical cancer cases and is associated with many other anogenital and oropharyngeal cancers. Previous work from our laboratory has identified cell-surface-expressed vimentin as a novel HPV16 pseudovirus (HPV16-PsVs)-binding molecule modulating its infectious potential. To further explore its mode of inhibiting HPV16-PsVs internalisation, we supplemented it with exogenous recombinant human vimentin and show that only the globular form of the molecule (as opposed to the filamentous form) inhibited HPV16-PsVs internalisation in vitro. Further, this inhibitory effect was only transient and not sustained over prolonged incubation times, as demonstrated in vitro and in vivo, possibly due to full-entry molecule engagement by the virions once saturation levels have been reached. The vimentin-mediated delay of HPV16-PsVs internalisation could be narrowed down to affecting multiple steps during the virus' interaction with the host cell and was found to affect both heparan sulphate proteoglycan (HSPG) binding as well as the subsequent entry receptor complex engagement. Interestingly, decreased pseudovirus internalisation (but not infection) in the presence of vimentin was also demonstrated for oncogenic HPV types 18, 31 and 45. Together, these data demonstrate the potential of vimentin as a modulator of HPV infection which can be used as a tool to study early mechanisms in infectious internalisation. However, further refinement is needed with regard to vimentin's stabilisation and formulation before its development as an alternative prophylactic means.


Asunto(s)
Papillomavirus Humano 16/fisiología , Vimentina/farmacología , Internalización del Virus , Alphapapillomavirus/fisiología , Animales , Membrana Celular/virología , Femenino , Células HEK293 , Proteoglicanos de Heparán Sulfato/metabolismo , Interacciones Huésped-Patógeno , Humanos , Ratones , Ratones Endogámicos C57BL , Infecciones por Papillomavirus/virología , Conformación Proteica , Receptores Virales/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/farmacología , Vimentina/química , Pseudotipado Viral , Virión/fisiología
13.
Molecules ; 26(21)2021 Oct 28.
Artículo en Inglés | MEDLINE | ID: mdl-34770931

RESUMEN

The application of aptamers in biomedicine is emerging as an essential technology in the field of cancer research. As small single-stranded DNA or RNA ligands with high specificity and low immunogenicity for their targets, aptamers provide many advantages in cancer therapeutics over protein-based molecules, such as antibodies. Vimentin is an intermediate filament protein that is overexpressed in endothelial cells of cancerous tissue. High expression levels of vimentin have been associated with increased capacity for migration and invasion of the tumor cells. We have selected and identified thioated aptamers with high specificity for vimentin using human ovarian cancer tissues. Tentative binding motifs were chosen for two vimentin aptamers based on predicted secondary structures. Each of these shorter, tentative binding motifs was synthesized, purified, and characterized via cell binding assays. Two vimentin binding motifs with high fidelity binding were selected and further characterized via cell and tissue binding assays, as well as flow cytometric analysis. The equilibrium binding constants of these small thioated aptamer constructs were also determined. Future applications for the vimentin binding aptamer motifs include conjugation of the aptamers to synthetic dyes for use in targeted imaging and therapy, and ultimately more detailed and precise monitoring of treatment response and tumor progression in ovarian pathology.


Asunto(s)
Aptámeros de Nucleótidos/genética , Secuencia de Bases , Motivos de Nucleótidos , Vimentina/genética , Aptámeros de Nucleótidos/química , Sitios de Unión , Biomarcadores de Tumor , Femenino , Citometría de Flujo , Técnica del Anticuerpo Fluorescente , Humanos , Cinética , Conformación de Ácido Nucleico , Neoplasias Ováricas/diagnóstico , Neoplasias Ováricas/genética , Unión Proteica , Técnica SELEX de Producción de Aptámeros/métodos , Vimentina/química , Vimentina/metabolismo
14.
Phys Rev Lett ; 127(10): 108101, 2021 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-34533352

RESUMEN

We investigate the rheological properties of interpenetrating networks reconstituted from the main cytoskeletal components: filamentous actin, microtubules, and vimentin intermediate filaments. The elastic modulus is determined largely by actin, with little contribution from either microtubules or vimentin. However, vimentin dramatically impacts the relaxation, with even small amounts significantly increasing the relaxation time of the interpenetrating network. This highly unusual decoupling between dissipation and elasticity may reflect weak attractive interactions between vimentin and actin networks.


Asunto(s)
Filamentos Intermedios/química , Modelos Químicos , Vimentina/química , Actinas/química , Actinas/metabolismo , Citoesqueleto/química , Citoesqueleto/metabolismo , Células Eucariotas , Filamentos Intermedios/metabolismo , Microtúbulos/química , Microtúbulos/metabolismo , Reología/métodos , Vimentina/metabolismo
15.
Mediators Inflamm ; 2021: 7534601, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34373677

RESUMEN

BACKGROUND: Telocytes (TCs) are a distinct type of interstitial cells that play a vital role in the pathogenesis of ulcerative colitis and colonic tissue hemostasis. The aim of this study was to examine the effect of nanocurcumin (NC) on the morphometric and immunohistochemical characterization of TCs in the ulcerative colitis (UC) rat model. METHODS: Forty rats were randomly divided into control, NC, UC, and UC+NC groups. At the end of the experiment, the colon was dissected and prepared for histopathological and immunohistochemical assessment. Tissue homogenates were prepared for real-time PCR assessment of interleukin-6 (IL-6), tumor necrosis factor-alpha (TNF-α), and transforming growth factor-beta (TGF-ß) gene expression. Our results revealed extensive mucosal damage with inflammatory cell infiltration, significant reduction of CD34, and vimentin immunostained TCs in the colon of the UC group with significant elevation of expression of IL-6, TNF-α, and TGF-ß. The UC+NC-treated group revealed significant elevation of TC count compared to the UC group besides, a significant reduction of the three gene expression. CONCLUSION: NC successfully targeted the colonic tissue, improved the mucosal lesion, preserve TCs distribution, and count through its anti-inflammatory and fibrinolytic properties.


Asunto(s)
Colitis Ulcerosa/patología , Colon/patología , Curcumina/química , Nanopartículas/química , Telocitos/patología , Animales , Colitis , Colon/metabolismo , Modelos Animales de Enfermedad , Fibrinólisis , Regulación de la Expresión Génica , Inmunohistoquímica , Inflamación , Interleucina-6/metabolismo , Mucosa Intestinal/metabolismo , Masculino , Ratas , Ratas Wistar , Espectroscopía Infrarroja por Transformada de Fourier , Factor de Crecimiento Transformador beta1/biosíntesis , Factor de Necrosis Tumoral alfa/metabolismo , Vimentina/química
16.
J Nanobiotechnology ; 19(1): 185, 2021 Jun 16.
Artículo en Inglés | MEDLINE | ID: mdl-34134721

RESUMEN

BACKGROUND: Circulating tumor cells (CTCs) are the dominant factor leading to tumor metastasis. This study aims to investigate the effect of disparate sources of CTCs on the treatment and prognosis of patients with advanced tumors by analyzing the number and gene mutations change of CTCs in arterial and venous blood in patients with advanced tumors. RESULTS: A CTCs sorting system was constructed based on Vimentin-immunolipid magnetic balls (Vi-IMB) and EpCAM immunolipid magnetic balls (Ep-IMB). Results showed that the prepared Ep-IMB and Vi-IMB had lower cytotoxicity, better specificity and sensitivity. The number of arterial CTCs was higher than that of venous CTCs, with a statistically significant difference (P < 0.05). Moreover, the prognosis of the low positive group of total CTCs in arterial blood and venous blood was higher than that of the high positive group, with a statistical significance (P < 0.05). The genetic testing results showed that the targeted drug gene mutations in tissues, arterial CTCs and venous CTCs showed a complementary trend, indicating that there was heterogeneity among different tumor samples. CONCLUSIONS: CTCs in blood can be efficiently captured by the CTCs sorting system based on Vi-LMB/Ep-LMB, and CTCs detection in arterial blood can be utilized to more accurately evaluate the prognosis and predict postoperative progress. It is further confirmed that tumor samples from disparate sources are heterogeneous, providing a reference basis for gene mutation detection before clinical targeted drug treatment, and the detection of CTCs in arterial blood has more potential clinical application value. TRIAL REGISTRATION: The Ethics Committee of Putuo Hospital, PTEC-A-2019-18-1. Registered 24 September 2019.


Asunto(s)
Biomarcadores de Tumor/genética , Molécula de Adhesión Celular Epitelial/genética , Magnetismo , Células Neoplásicas Circulantes , Vimentina/genética , Línea Celular Tumoral , Molécula de Adhesión Celular Epitelial/química , Fluorescencia , Humanos , Fenómenos Magnéticos , Mutación , Pronóstico , Vimentina/química
17.
Vet Microbiol ; 259: 109133, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-34087674

RESUMEN

Vimentin, a member of intermediate filaments, has been documented to be involved in viral infections. Despite several studies focusing on its involvement in porcine reproductive and respiratory syndrome virus (PRRSV) infection, the detailed mechanisms by which vimentin takes effect remain to be fully elucidated. In the present study, we identified a previously unrecognized role of vimentin rearrangement in PRRSV replication. We monitored that PRRSV infection induced vimentin reorganization during post-entry stage, which was beneficial for viral replication. In detail, the serine residue of vimentin was phosphorylated at position 38 (Ser38) by calcium calmodulin-dependent protein kinase II gamma (CaMKIIγ), and vimentin filaments reorganized into cage-like structures enwrapping PRRSV replication complex (RC) at the perinuclear location. Taken together, these results expand the knowledge of PRRSV replication, and provide novel targets for prevention and control of PRRSV.


Asunto(s)
Virus del Síndrome Respiratorio y Reproductivo Porcino/fisiología , Vimentina/metabolismo , Replicación Viral , Animales , Línea Celular , Fosforilación , Síndrome Respiratorio y de la Reproducción Porcina/virología , Porcinos , Vimentina/química
18.
Biochem J ; 478(12): 2233-2245, 2021 06 25.
Artículo en Inglés | MEDLINE | ID: mdl-34037204

RESUMEN

Caspases are a family of enzymes that play roles in cell death and inflammation. It has been suggested that in the execution phase of the apoptotic pathway, caspase-3, -6 and -7 are involved. The substrate specificities of two proteases (caspases 3 and 7) are highly similar, which complicates the design of compounds that selectively interact with a single enzyme exclusively. The recognition of residues other than Asp in the P1 position of the substrate by caspase-3/-7 has been reported, promoting interest in the effects of phosphorylation of amino acids in the direct vicinity of the scissile bond. To evaluate conflicting reports on this subject, we synthesized a series of known caspase-3 and -7 substrates and phosphorylated analogs, performed enzyme kinetic assays and mapped the peptide cleavage sites using internally quenched fluorescent peptide substrates. Caspases 3 and 7 will tolerate pSer at the P1 position but only poorly at the P2' position. Our investigation demonstrates the importance of peptide length and composition in interpreting sequence/activity relationships. Based on the results, we conclude that the relationship between caspase-3/-7 and their substrates containing phosphorylated amino acids might depend on the steric conditions and not be directly connected with ionic interactions. Thus, the precise effect of phospho-amino acid residues located in the vicinity of the cleaved bond on the regulation of the substrate specificity of caspases remains difficult to predict. Our observations allow to predict that natural phosphorylated proteins may be cleaved by caspases, but only when extended substrate binding site interactions are satisfied.


Asunto(s)
Proteínas Adaptadoras Transductoras de Señales/química , Caspasa 3/metabolismo , Caspasa 7/metabolismo , Fragmentos de Péptidos/metabolismo , Proteolisis , Serina/metabolismo , Factores de Transcripción/química , Vimentina/química , Sitios de Unión , Caspasa 3/genética , Caspasa 7/genética , Humanos , Cinética , Modelos Moleculares , Fosforilación , Serina/química , Especificidad por Sustrato , Proteínas Señalizadoras YAP
19.
FASEB J ; 35(3): e21389, 2021 03.
Artículo en Inglés | MEDLINE | ID: mdl-33583081

RESUMEN

The glial fibrillary acidic protein (GFAP) is a type III intermediate filament (IF) protein that is highly expressed in astrocytes, neural stem cells, and in gliomas. Gliomas are a heterogeneous group of primary brain tumors that arise from glia cells or neural stem cells and rely on accurate diagnosis for prognosis and treatment strategies. GFAP is differentially expressed between glioma subtypes and, therefore, often used as a diagnostic marker. However, GFAP is highly regulated by the process of alternative splicing; many different isoforms have been identified. Differential expression of GFAP isoforms between glioma subtypes suggests that GFAP isoform-specific analyses could benefit diagnostics. In this study we report on the differential expression of a new GFAP isoform between glioma subtypes, GFAPµ. A short GFAP transcript resulting from GFAP exon 2 skipping was detected by RNA sequencing of human glioma. We show that GFAPµ mRNA is expressed in healthy brain tissue, glioma cell lines, and primary glioma cells and that it translates into a ~21 kDa GFAP protein. 21 kDa GFAP protein was detected in the IF protein fraction isolated from human spinal cord as well. We further show that induced GFAPµ expression disrupts the GFAP IF network. The characterization of this new GFAP isoform adds on to the numerous previously identified GFAP splice isoforms. It emphasizes the importance of studying the contribution of IF splice variants to specialized functions of the IF network and to glioma research.


Asunto(s)
Empalme Alternativo , Neoplasias Encefálicas/metabolismo , Proteína Ácida Fibrilar de la Glía/biosíntesis , Glioma/metabolismo , Encéfalo/metabolismo , Línea Celular Tumoral , Proteína Ácida Fibrilar de la Glía/química , Proteína Ácida Fibrilar de la Glía/genética , Humanos , Biosíntesis de Proteínas , Isoformas de Proteínas , Vimentina/química
20.
Adv Biosyst ; 4(11): e2000111, 2020 11.
Artículo en Inglés | MEDLINE | ID: mdl-33135378

RESUMEN

Intermediate filament (IF) proteins are a class of proteins that constitute different filamentous structures in mammalian cells. As such, IF proteins are part of the load-bearing cytoskeleton and support the nuclear envelope. Molecular dynamics simulations show that IF proteins undergo secondary structural changes to compensate mechanical loads, which is confirmed by experimental in vitro studies on IF hydrogels. However, the structural response of intracellular IF to mechanical load is yet to be elucidated in cellulo. Here, in situ nonlinear Raman imaging combined with multivariate data analysis is used to quantify the intracellular secondary structure of the IF cytoskeletal protein vimentin under different states of cellular tension. It is found that cells under native cellular tension contain more unfolded vimentin than chemically or physically relaxed specimens. This indicates that the unfolding of IF proteins occurs intracellularly when sufficient forces are applied, suggesting that IF structures act as local force sensors in the cell to mark locations under large mechanical tension.


Asunto(s)
Desplegamiento Proteico , Vimentina , Células HeLa , Humanos , Filamentos Intermedios/química , Filamentos Intermedios/metabolismo , Mecanotransducción Celular/fisiología , Microscopía , Estructura Secundaria de Proteína , Espectrometría Raman , Vimentina/química , Vimentina/metabolismo
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